Sample processing
What is "pretreatment"?
Although it sounds like something that ought to come before the treatment, pretreatment
it the term that is customarily used to describe the processes used to isolate the
required carbon fraction from a sample for radiocarbon dating. In most cases, the desired
fraction is carbon from molecules indigenous to the organism when is was alive, and
isolating it means removing any contaminating organic materials that may have been
introduced later.
Summary of Pretreatment Procedures
Physical pretreatment:
The first step for all samples submitted to the laboratory is physical examination and
cleaning. It may seem obvious, but identification labels and descriptions are examined
carefully to insure that what we are about to analyse is what the submitter thinks she has
submitted. This is not a trivial step:
- A textile may be made of more than one type of material.
- Charcoal may prove to be degraded and oxidized plant fragments.
- Shells may have a powdery/chalky appearance, indicating recrystallization.
- Sediments may be submitted which, when examined under the microscope, turn out to be a
mixture of soil, flecks of charcoal, fragments of wood and plant debris. Each of these
components was deposited in the sediment from a different origin and possibly could have
different ages.
In each of these cases, we would report our observations and discuss with the submitter
which fraction is the most optimal for dating based on her research objectives. Because
the sample size requirement for AMS is so small, it is possible that different fractions
within the sample can be separated, dated independently and the ages compared.
During physical pretreatment, samples are examined under a microscope. Obvious
extraneous materials such as rootlets or thread are picked out with forceps. Surface dirt
and contamination such as glue or ink is removed. Exterior parts of the sample are washed
or otherwise cleaned as appropriate for the type of sample. Some samples are sieved to
select an appropriate size fraction. Finally, the sample is crushed or ground to reduce it
in size and increase the surface area.
Chemical pretreatment:
The objective in chemical pretreatment is to remove any contaminants in the sample that
can be made soluble by heating in a series of solvents. While pretreatment procedures are
standardized according to our QA manual, they must also remain flexible to take into
account the varying condition of the samples submitted to the laboratory. There are
variants depending upon both the condition and size of the sample. For example, wood may
have the cellulose extracted or be treated with the A/A/A method.
For some samples, sodium
pyrophosphate is added to the sodium hydroxide in the alkaline solution to help
deflocculate clays for easy removal. If there is reason to suspect that not all the
contaminants were removed, a step may be repeated or the concentration of a solution
increased.
The following are pretreatment procedures for the most common materials
submitted to the laboratory. The list is by no means exhaustive and numerous pretreatment
strategies exist. If you want information on the pretreatment of a sample type that is not
on this list, please contact us.
Charcoal, plant material, degraded wood:
- After physical pretreatment and removal of any rootlets or visible contamination, these
types of sample materials are pretreated with what is termed the Acid/Alkali/Acid (A/A/A)
method.
In A/A/A, the sample is heated in 0.5M HCl, filtered, rinsed, heated in 0.1M NaOH,
filtered, rinsed, and finally heated a last time in 0.5M HCl, filtered, rinsed with dH2O
and dried.
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- Soils, sediment, peat:
Two different methods my be used for treatment of soils, sediments and peats.
- Total Organic Carbon (TOC) removes only inorganic carbon and absorbed CO2,
leaving the entire organic carbon fraction.
- Acid/Alkali/Acid (A/A/A) treatment removes all but the least mobile organic fraction,
leaving the "humin" fraction only.
In ordinary situations, A/A/A is the preferred method of treatment, but sometimes
researchers studying the movement of carbon in soils prefer to date the TOC fraction or
the humic acid fraction. For separation and analysis of the complex cycling of Soil
Organic Matter (SOM), specialized pretreatment procedures exist (c.f. Trumbore
and Zheng 1996; Leavitt et al. 1996).
- TOC:
- the sample is heated in 0.1M HCl, then freeze-dried.
- A/A/A:
- the sample is heated in 0.5M HCl, filtered, rinsed with dH2O, heated in 0.1M
NaOH/0.1M Na4P2O7, filtered, rinsed with dH2O,
and finally heated a last time in 0.5M HCl, filtered, rinsed and dried.
- Humic acid precipitation:
- the sample is heated in 0.5M HCl, filtered, rinsed with dH2O, heated in 0.1M
NaOH and filtered. The NaOH filtrate is collected. Humic acids in solution are
precipitated out with the addition of 6M HCl. The precipitate is collected, redissolved in
NaOH, then reprecipitated with 6M HCl, and dried.
- Wood - cellulose extraction:
- The cleaned ground wood is heated in 0.5M HCl, filtered, and rinsed with dH2O
to neutral. It is then heated in 0.1M NaOH, filtered, rinsed with dH2O and
repeated. After the second NaOH step the residue is heated in a 4% solution of H2O2
at pH 11. This step is repeated until the residue is bleached, then it is filtered, rinsed
with dH2O. Finally, it is heated again in 0.5M HCl, filtered, rinsed in dH2O
and dried.
- Textiles
- Textiles submitted to the laboratory vary in their degrees of preservation. Old wool for
example may be quite degraded and readily hydrolyse in alkaline solution. The cellulose of
cotton will usually sustain a more vigorous treatment and large samples of hemp or other
cellulosic fibers may even be subject to cellulose extraction method described above. In
general, the purpose of pretreatment of textiles is to remove dirt, grease, fats and oils,
and dyes or coloring agents, if soluble.
Depending upon the condition of the fibers,
textiles go through the following sequence: after physical cleaning and shredding into
small fibers, the sample is heated in hexane, filtered and dried, heated in isopropanol,
filtered and dried, heated in acetone, filtered and dried. The residue is then treated
with a series of acid/alkali/acid washes with 0.1M HCl and 0.1M NaOH, rinsed thoroughly
with dH2O, and dried.
- Bone
- After examination and physical cleaning, ground bone powder is demineralized with 0.5M
HCl until carbonates are dissolved. The rough collagen is rinsed to neutral and converted
to gelatin in hot 0.01M HCl in an inert atmosphere. The gelatin is then filtered twice,
and freeze dried. Sub-samples of the gelatin may be taken at this time for stable carbon
and nitrogen analysis and amino acid analysis, in addition to the AMS measurement.
- Shell and other carbonates:
- After physical examination and cleaning of the surface (and evaluating the need for
X-ray diffraction), the surface of shells may be etched with a 0.1M solution of HCl,
rinsed with dH2O and dried. CO2 is produced from the carbonate through the
addition of 85% o-phosphoric acid in a closed, evacuated glass vessel.
After a sample has been pretreated, it is ready for the next stage in the dating
process: combustion. When organic materials are burned in oxygen, the carbon is converted
to carbon dioxide (CO2) with water and often other compounds as by-products of
the reaction. The sample CO2 can be used in gas proportional counting or
converted to benzene for LSC decay counting. For AMS dating, the CO2 is
converted to graphite.
- Combustion
- In the combustion stage of sample processing, carbon dioxide (CO2) gas is
produced from the pretreated residue of samples and purified for graphitization. Samples
are combusted at 900oC for 2 hours in evacuated, sealed quartz tubes with
cupric oxide and silver wire. The cupric oxide provides oxygen for the combustion and the
silver isolates sulphur and halogens in a solid form. After combustion, the CO2
is cryogenically purified by passing it through dewars of ethanol/dry ice to trap water.
The purified CO2 is collected in a glass vessel for transport to the
graphitization and mass spectrometry laboratories.
- Graphitization
- The final step in sample processing is the conversion of the sample CO2 to
elemental carbon graphite. In the graphitization laboratory, the sample CO2 is
mixed with a stoichiometric amount of hydrogen gas inside a glass reaction vessel. The
reaction vessel contains a small amount of iron powder which will act as a catalyst for
the reaction. The reaction vessel is placed in a 700o C furnace and in about 5
hours the CO2 converts to graphite. Water is trapped out as a by-product of the
reaction.
- Stable isotope measurements
- It is standard procedure to measure d13C on all
samples, using conventional mass spectrometry. The cost of this is included in the overall
price of the AMS measurement. Note: the d13C value is measured on the CO2 gas resulting from the sample combustion, and is required for correcting the radiocarbon result for isotopic fractionation. While generally it will closely reflect the stable isotope ratio in the parent sample, we do not warrant it as an accurate estimate of this quantity.
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